| 1. |
Haussler, D. (1998) Computational genefinding, in Trends Guide in Bioinformatics (Brenner, S. and Lewitter, F., eds.), Elsevier Science, Cambridge, UK, pp. 12–15.
|
| |
| 2. |
Griffin, H. G. and Griffin, A. M. (1994) Computer analysis of sequence data, in Methods in Molecular Biology, vol. 24: Computer Analysis of Sequence Data (Griffin, A. M. and Griffin, H. G., eds), Humana, Totowa, NJ, pp. 1–8.
|
| |
| 3. |
Altschul, S. F. (1998) Fundamentals of database searching, in Trends Guide in Bioinformatics (Brenner, S. and Lewitter, F., eds.), Elsevier Science, Cambridge, UK, pp. 7–9.
|
| |
| 4. |
Brenner, S. (1998) Practical database searching, in Trends Guide in Bioinformatics (Brenner, S. and Lewitter, F., eds.), Elsevier Science, Cambridge, UK, pp. 9–12.
|
| |
| 5. |
Maizel, J. V. J. and Lenk, R. P. (1981) Enhanced graphic matrix analysis of nucleic acid and protein sequences. Proc. Natl. Acad. Sci. USA
78, 7665–7669.
|
| |
| 6. |
Needleman, S. B. and Wunsch, C. D. (1970) A general method applicable to the search for similarities in the amino acid sequence
of two proteins. J. Mol. Biol.
48, 443–453.
|
| |
| 7. |
Smith, T. F. and Waterman, M. S. (1981) Comparison of biosequences. Annu. Rev. Biophys. Biophys. Chem.
2, 482–489.
|
| |
| 8. |
Higgins, D. G. and Sharp, P. M. (1989) Fast and sensitive multiple sequence alignments on a microcomputer. Comput. Appl. Biosci.
5, 151–153.
|
| |
| 9. |
Pearson, W. R. and Lipman, D. J. (1988) Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA
85, 2444–2448.
|
| |
| 10. |
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. (1990) Basic local alignment search tool. J. Mol. Biol.
215, 403–410.
|
| |
| 11. |
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., et al. (1997) Gapped BLAST and PSI-BLAST:
a new generation of protein database search programs. Nucleic Acids Res.
25, 3389–3402.
|
| |
| 12. |
Chou, P. Y. and Fasman, G. D. (1978) Prediction of secondary structure of proteins from their amino acid sequence. Adv. Enzymol.
47, 45–147.
|
| |
| 13. |
Engelman, D. M., Steitz, T. A., and Goldman, A. (1986) Identifying nonpolar transbilayer helices in amino acid sequences of
membrane proteins. Annu. Rev. Biophys. Biophys. Chem.
15, 321–353.
|
| |
| 14. |
Garnier, J., Osguthorpe, D. J., and Robson, B. (1978) Analysis of the accuracy and implications of simple methods for predicting
the secondary structure of globular proteins. J. Mol. Biol.
120, 97–120.
|
| |
| 15. |
Kyte, J. and Doolittle, R. F. (1982) A simple method for displaying the hydropathic character of a protein. J. Mol. Biol.
157, 105–132.
|
| |
| 16. |
Eisenberg, D., Weiss, R. M., and Terwilliger, T. C. (1984) The hydrophobic moment detects periodicity in protein hydrophobicity.
Proc. Natl. Acad. Sci. USA
81, 140–144.
|
| |
| 17. |
Finer-Moore, J. and Stroud, R. M. (1984) Amphipathic analysis and possible formation of the ion channel in an acetylcholine
receptor. Proc. Natl. Acad. Sci. USA
81, 155–159.
|
| |
| 18. |
Emini, E. A., Hughes, J. V., Perlow, D. S., and Boger, J. (1985) Induction of hepatitis A virus-neutralizing antibody by a
virus-specific synthetic peptide. J. Virol.
55, 836–839.
|
| |
| 19. |
Karplus, P. A. and Schulz, G. E. (1985) Predicition of chain flexibility in proteins. Naturwissen
72, 212,213.
|
| |
| 20. |
Jameson, B. A. and Wolf, H. (1988) The antigenic index: a novel algorithm for predicting antigenic determinants. Comput. Appl. Biosci.
4, 181–186.
|
| |