| 1. |
He, Q., Marjamäki, M., Soini, H., Mertsola, J., and Viljanen, M. K. (1994) Primers are decisive for sensitivity of PCR. BioTechniques
17, 82–87.
|
| |
| 2. |
Rychlik, W., Spencer, W. J., and Rhoads, R. E. (1990) Optimization of the annealing temperature for DNA amplification in vitro.
(Erratum in Nucleic Acids Res 1991; 19:698) Nucleic Acids Res.
18, 6409–6412.
|
| |
| 3. |
McCulloch, R. K., Choong, C. S., and Hurley, D. M. (1995) An evaluation of competitor type and size for use in the determination
of mRNA by competitive PCR. PCR Meth. Appl.
4, 219–226.
|
| |
| 4. |
Toouli, C. D., Turner, D., Grist, S. A., and Morley, A. A. (1999) The effect of cycle number and target size on polymerase
chain reaction amplification of polymorphic repetitive sequences. Anal. Biochem.
280, 324–326.
|
| |
| 6. |
Greisen, K., Loeffelholz, M., Purohit, A., and Leong, D. (1994) PCR primers and probes for the 16S rRNA gene of most species
of pathogenic bacteria, including bacteria found in cerebrospinal fluid. J. Clin. Microbiol.
32, 335–351.
|
| |
| 7. |
van Camp, G., Fierens, H., Vandamme, P., Goossens, H., Huyghebaert, A., and de Wachter, R. (1993) Identification of enterpathogenic
Campylobacter species by oligonucleotide probes and polymerase chain reaction based on 16S rRNA genes. Syst. Appl. Microbiol.
16, 30–36.
|
| |
| 8. |
Giesendorf, B.A. J., Quint, W. G. V., Henkens, M. H. C., Stegmann, H., Huf, F. A., and Niesters, H. G. M. (1992) Rapid and
sensitive detection of Campylobacter ssp. in chicken products by using the polymerase chain reaction. Appl. Environ. Microbiol.
58, 3804–3808.
|
| |
| 9. |
Metherell, L. A., Logan, J. M. J., and Stanly, J. (1999) PCR-enzyme-linked immunosorbent assay for detection and identification
of Campylobacter species: Application to isolates and stool samples. J. Clin. Microbiol.
37, 433–435.
|
| |
| 10. |
Cardarelli-Leite, P., Blom, K., Patton, C. M., Nicholson, M. A., Steigerwalt, A. G., Hunter, S. B., Brenner D. J., Barrett
T. J., and Swaminathan, B. (1996) Rapid identification of Campylobacter species by restriction fragment length polymorphism analysis of a PCR-amplified fragment of the gene coding for 16S rRNA.
J. Clin. Microbiol.
34, 62–67.
|
| |
| 11. |
Heinemann M. B., Garcia, J. F. Nunes, C. M., et al. (2000) Detection and differentiation of Leptospira spp. serovars in bovine semen by polymerase chain reaction and restriction fragment length polymorphism. Vet. Microbiol.
73, 261–267.
|
| |
| 12. |
Lammler C. Abdulmawjood, A., and Weiss, R. (1998) Properties of serological group B streptococci of dog, cat and monkey origin.
Zentralbl. Veterinärmed.
49, 561–566.
|
| |
| 13. |
Messmer T. O., Skelton, S. K., Moroney, J. F., Daugharty, H. and Fields, B. S. (1997) Application of a nested, multiplex PCR
to psittacosis outbreaks. J. Clin. Microbiol.
35, 2043–2046.
|
| |
| 14. |
Madico, G., Quinn, T. C., Bomann, J., and Gaydos, C. A. (2000) Touchdown enzyme release-PCR for detection and identification
of Chlamydia trachomatis, C. pneumoniae, and C. psittaci using the 16S and 16S-23S spacer rRNA genes. J. Clin. Microbiol.
38, 1085–1093.
|
| |
| 15. |
Kox, L. F. F., van Leeuwen, J., Knijper, S., Jansen, H. M., and Kolk, A. H. J. (1995) PCR assay based on DNA coding for rRNA
for detection and identification of mycobacteria in clinical samples. J. Clin. Microbiol.
33, 3225–3233.
|
| |
| 16. |
Oggioni, M. R., Fattorini, L., Li, B., et al. (1995) Identification of Mycobacterium tuberculosis complex, Mycobacterium avium and Mycobacterium intracellulare by selective nested polymerase chain reaction. Mol. Cell. Probes
9, 321–326.
|
| |
| 17. |
Bascunana, C. R., Mattsson, J. G., Bölske, G., and Johansson, K.-E. (1994) Characterization of the 16S rRNA genes from Mycoplasma sp. strain F38 and development of an identification system based on PCR. J. Bacteriol.
179, 2577–2586.
|
| |
| 18. |
Giacometti, M., Nicolet, J., Johansson, K.-E., Naglic, T., Degiorgis, M. P., and Frey, J. (1999) Detection and identification
of Mycoplasma conjunctivae in infectious keratoconjunctivitis by PCR based on the 16S rRNA gene. Zentralbl. Veterinärmed.
46, 173–180.
|
| |
| 19. |
Persson, A., Pettersson, B., Bölske, G., and Johansson, K.-E. (1999) Diagnosis of contagious bovine pleuropneumonia by PCR-laser-induced
fluorescence and PCR-restriction endonuclease analysis based on the 16S rRNA genes of My co-plasma mycoides subsp. mycoides SC. J. Clin. Microbiol.
37, 3815–3821.
|
| |
| 20. |
Wang, R.F., Cao, W.W., Franklin, W., Campbell, W., and Cerniglia, C.E. (1994) A 16S rDNA-based PCR method for rapid and specific
detection of Clostridium perfringens in food. Mol. Cell. Probes
8, 131–138.
|
| |
| 21. |
Lantz, P. G., Knutsson, R., Blixt, Y., Al Soud, W. A., Borch, E., and Radström P. (1998) Detection of pathogenic Yersinia enterocolitica in enrichment media and pork by a multiplex PCR: a study of sample preparation and PCR-inhibitory components. Int. J. Food Microbiol.
45, 93–105.
|
| |
| 22. |
Subramaniam, S., Chua, K. L., Tan, H. M., Loh, H., Kuhnert, P., and Frey, J. (1997) Phylogenetic position of Riemerella anatipestifer based on 16S rRNA gene sequences. Int. J. Syst. Bacteriol.
47, 562–565.
|
| |
| 23. |
Mattsson, J. G., Guss, B., and Johansson, K.-E. (1994) The phylogeny of Myco-plasma bovis as determined by sequence analysis of the 16S rRNA gene. FEMS Microbiol. Lett.
115, 325–328.
|
| |
| 24. |
Helgason, E., Okstad, O.A., Caugant, D.A., et al. (2000) Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis- One species on the basis of genetic evidence. Appl. Environm. Microbiol.
66, 2627–2630.
|
| |
| 25. |
Fermér, C. and Olsson Engvall, E. (1999) Specific PCR identification and differentiation of the thermophilic campylobacters,
Campy lob act er jejuni, C. coli, C. lari, and C. upsaliensis. J. Clin. Microbiol.
37, 3370–3373.
|
| |
| 26. |
Eyers, M., Chapelle, S., van Camp, G., Goossens, H., and de Wachter, R. (1993) Dis-crimination among thermophilic Campylobacter species by polymerase chain reaction amplification of 23S rRNA gene fragments. J. Clin. Microbiol.
31, 3340–3243.
|
| |
| 27. |
Everett, K. D. E., and Andersen, A. A. (1999) Identification of nine species of the Chlamydiaceae using RFLP-PCR. Int. J. Syst. Bacteriol.
49, 217–224.
|
| |
| 28. |
Gürtler, V. and Stanisich, V. A. (1996) New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer
region. Microbiology
142, 3–16.
|
| |
| 29. |
Scheinert, P., Krausse, R., Ullmann, U., Soller, R., and Krupp, G. (1996) Molecular differentiation of bacteria by PCR amplification
of the 16S-23S rRNA spacer. J. Microbiol. Meth.
26, 103–117.
|
| |
| 30. |
O’Sullivan, N. A., Fallon, R., Carroll, C., Smith, T., and Maher, M. (2000) Detection and differentiation of Campylobacter coli in broiler chicken samples using a PCR/DNA probe membrane based colorimetric detection assay. Mol. Cell. Probes
14, 7–16.
|
| |
| 31. |
Cartwright, C. P., Stock, F., Beekmann, S. E., Williams, E. C., and Gill, V. J. (1995) PCR amplification of rRNA intergenic
spacer regions as a method for epidemiologic typing of Clostridium difficile. J. Clin. Microbiol.
33, 184–187.
|
| |
| 32. |
Mitchell, T. G., Freedman, E. Z., White, T. J., and Taylor, J. W. (1994) Unique oligonucleotide primers in PCR for identification
of Cryptococcus neoformans. J. Clin. Microbiol.
32, 253–255.
|
| |
| 33. |
Rappelli, P., Are, R., Casu, G., Fiori, P. L., Cappuccinelli, P., and Aceti, A. (1998) Development of a nested PCR for detection
of Cryptococcus neoformans in cere-brospinal fluid. J. Clin. Microbiol.
36, 3438–3440.
|
| |
| 34. |
Drebót, M., Neal, S., Schlech, W., and Rozee, K. (1996) Differentiation of Listeria isolates by PCR amplicon profiling and sequence analysis of 16S-23S rRNA internal transcribed spacer loci. J. Appl. Bact.
80, 174–178.
|
| |
| 35. |
O’Connor, L., Joy, J., Kane, M., Smith, T. and Maher, M.(2000) Rapid polymerase chain reaction/DNA probe membrane-based assay
for the detection of Listeria and Listeria monocytogenes in food. J. Food Prot.
63, 337–342.
|
| |
| 36. |
Park, H., Jang, H., Kim, C., Chung, B., Chang, C. L., Park, S. K., and Song, S. (2000) Detection and identification of mycobacteria
by amplification of the internal transcribed spacer regions with genus-and species-specific PCR primers. J. Clin. Microbiol.
38, 4080–4085.
|
| |
| 37. |
Uemori, T., Asada, K., Kato, I., and Harasawa, R. (1992) Amplification of the 16S-23S spacer region in rRNA operons of mycoplasmas
by the polymerase chain reaction. System Appl. Microbiol.
15, 181–186.
|
| |
| 38. |
Brickell, S. K., Thomas, L. M., Long, K. A., Panaccio, M., and Widders, P. R. (1998) Development of a PCR test based on a
gene region associated with the pathogenicity of Pasteurella multocida serotype B:2, the causal agent of haemorrhagic septicaemia in Asia. Vet. Microbiol.
59, 295–307.
|
| |
| 39. |
Gill, S., Belles-Isles, J., Brown, G., Gagné, S., Lemieux, C., Mercier, J.-P., and Dion, P. (1994) Identification of variability
of ribosomal DNA spacer from Pseudomonas soil isolates. Can. J. Microbiol.
40, 541–547.
|
| |
| 40. |
Whiley, R. A., Duke, B., Hardie, J. M., and Hall, L. M. C. (1995) Heterogeneity among 16S-23S rRNA intergenic spacers of species
within the Streptococcus milleri group. Microbiology
141, 1461–1467.
|
| |
| 41. |
Forsman, P., Tilsala-Timisjarvi, A., and Alatossava, T. (1997) Identification of staphylococcal cause of bovine mastitis using
16S-23S rRNA spacer regions. Microbiology
143, 3491–3500.
|
| |
| 42. |
Fach, P. and Guillou, J.P. (1993) Detection by in vitro amplification of the alpha-toxin (phospholipase C) gene from Clostridium perfingens. J. Appl. Bacteriol. 74, 61–66.
|
| |
| 43. |
Buogo, C., Capaul, S., Häni, H., Frey, J., and Nicolet, J. (1995) Diagnosis of Clostridium perfringens type C enteritis in pigs using a DNA amplification technique (PCR) Zentralbl. Veterinärmed.
42, 51–58.
|
| |
| 44. |
Meer, R. R. and Songer, J. G. (1997) Multiplex polymerase chain reaction assay for genotyping Clostridium perfringens. Am. J. Vet. Res. 58, 702–705.
|
| |
| 45. |
Karch, H., and Meyer, T. (1989) Single primer pair for amplifying segments of distinct Shiga-like toxin genes by polymerase
chain reaction. J. Clin. Microbiol.
27, 2751–2757.
|
| |
| 46. |
Feng, P., and Monday, S. R. (2000) Multiplex PCR for detection of trait and virulence factors in enterohemorrhagic Escherichia coli serotypes. Mol. Cell. Probes
14, 333–337.
|
| |
| 47. |
Hotzel, H., Erler, W., and Schimmel, D. (1997) Detection of dermonecrotic toxin genes in Pasteurella multocida strains using the polymerase chain reaction (PCR). Berl. Münch. Tierärztl. Wochenschr.
110, 139–142.
|
| |
| 48. |
Fisher, M. A., Weiser, G. C., Hunter, D. L., and Ward, A. C. (1999) Use of a polymerase chain reaction method to detect the
leukotoxin gene lktA in biogroup and biovariant isolates of Pasteurella haemolytica and P. trehalosi. Am. J. Vet. Res.
60, 1402–1406.
|
| |
| 49. |
Schaller, A., Djordjevic, S.P., Eamens, G.J., et al. (2001) Identification and detection of Actinobacillus pleuropneumoniae by PCR based on the gene apxIVA. Vet. Microbiol.
79, 47–62.
|
| |
| 50. |
Gram, T., Ahrens, P., Andreasen, M., and Nielsen, J.P. (2000) An Actinobacillus pleuropneumoniae PCR typing system based on the apx and omlA genes-evaluation of isolates from lungs and tonsils of pig. Vet. Microbiol.
75, 43–57.
|
| |
| 51. |
de la Puente-Redondo, V. A., del Blanco, N. G., Gutierrez-Martin, C. B., Mendez, J. N., and Rodriquez Ferri, E. F. (2000)
Detection and subtyping of Actinobacillus pleuropneumoniae strains by PCR-RFLP analysis of the tbpA and tbpB genes. Res. Microbiol.
151, 669–681.
|
| |
| 52. |
Ooyofo, B. A., Thornten, S. A., Burr, D. H., Trust, T. J., Pavlovskis, O. R., and Guerry, P. (1992) Specific detection of
Campylobacter jejuni and Campylobacter coli by using polymerase chain reaction. J. Clin. Microbiol.
30, 2613–2619.
|
| |
| 53. |
Kaltenböck, B., Schmeer, N., and Schneider, R. (1997) Evidence for numerous omp1 alleles of porcine Chlamydia trachomatis and novel chlamydial species obtained by PCR J. Clin. Microbiol.
35, 1835–1841.
|
| |
| 54. |
Caron, J., Ouardani, M., and Dea, S. (2000) Diagnosis and differentiation of Mycoplasma hyopneumoniae and Mycoplasma hyorhinis infection in pigs by PCR amplification of the p36 and p46 genes. J. Clin. Microbiol.
38, 1390–1396.
|
| |
| 55. |
Kasten, R. W., Carpenter, T. E., Snipes, K. P., and Hirsh, D. C. (1997) Detection of Pasteurella multocida-specific DNA in turkey flocks by use of the polymerase chain reaction. Avian. Dis.
41, 676–682.
|
| |
| 56. |
Baily, G. G., Krahn, L. B., Drasar, B. S., and Stocker, N. G. (1992) Detection of Brucella melitensis and Brucella abortus by DNA amplification. J. Tropical. Med. Hygiene, 95, 271–275.
|
| |
| 57. |
Englen, M. D. and Kelley, L. C. (2000) A rapid DNA isolation procedure for the identification of Campylobacter jejuni by the
polymerase chain reaction. Appl. Microbiol.
31, 421–426.
|
| |
| 58. |
van Doorn, L. J., Verschuuren-van Haperen A., Burnens, A., et al. (1999) Rapid identification of thermotolerant Campylobacter lari, and Campylobacter upsaliensis from various geographic locations by a GTPase-based PCR-reverse hybridization assay. J. Clin. Microbiol.
37, 1790–1796.
|
| |
| 59. |
Tanaka, K., Miyazaki, T., Maesaki, S., Mitsutake, K., Kakeya, H., Yamamoto, Y., Yanagihara, K., Hossain, M. A., Tashiro, T.,
and Kohno, S. (1996) Detection of Cryptococcus neoformans gene in patients with pulmonary cryptococcosis. J. Clin. Microbiol.
34, 2826–2828.
|
| |
| 60. |
Furrer B., Candrian, U., Hoefelein, Ch., and Luethy, J. (1991) Detection and identification of Listeria monocytogenes in cooked sausage products and in milk by in vitro amplification of haemolysin gene fragments. J. Appl. Bacteriol.
70, 372–379.
|
| |
| 61. |
Luk, J. M. C., Kongmuang, U., Reeves, P. R., and Lindberg, A. A. (1993) Selective amplification of abequose and paratose synthase
genes (rfb) by polymerase chain reaction for identification of Salmonella major serogroups (A, B, C2, and D). J. Clin. Microbiol.
31, 2118–2123.
|
| |
| 62. |
Hoorfar, J., Baggesen, D. L., and Porting, P. H. (1999) A PCR-based strategy for simple and rapid identification of rough
presumptive Salmonella isolates. J. Microbiol. Methods
35, 77–84.
|
| |
| 63. |
Pinnow, C. C., Butler, J. A., Sachse, K., Hotzel, H., Timms, L. L., and Rosenbusch, R. F. (2001) Detection of Mycoplasma bovis in preservative-treated field milk samples. J. Dairy Sci.
84, 1640–1645.
|
| |
| 64. |
Hotzel, H., Heller, M., and Sachse, K. (1999) Enhancement of Mycoplasma bovis detection in milk samples by antigen capture prior to PCR. Mol. Cell. Probes
13, 175–178.
|
| |
| 65. |
Subramaniam, S., Bergonier, D., Poumarat, F., Capaul, S., Schlatter, Y., Nicolet J., and Frey, J. (1998) Species identification
of Mycoplasma bovis and Mycoplasma agalactiae based on the uvrC genes by PCR. Mol. Cell. Probes
12, 161–169.
|
| |
| 66. |
Hance, A. J., Grandshamp, B., Levy-Frebault, V., Lecossier, D., Rauzier, J., Bocart, D., and Gisquel, B. (1989) Detection
and identification of mycobacteria by amplification of mycobacterial DNA. Mol. Microbiol.
3, 843–849.
|
| |
| 67. |
Steingrube, V. A., Gibson, J. L., Brown, B. A., Zhang, Y., Wilson, R. W., Rajagonpalan, M., and Wallace Jr., R. J. (1995)
PCR amplification and restriction endonuclease analysis of a 65-kilodalton heat shock protein gene sequence for taxonomic
separation of rapidly growing mycobacteria. J. Clin. Microbiol.
33, 149–153.
|
| |
| 68. |
Taylor, T. B., Patterson, C., Hale, Y., and Safranek, W. W. (1997) Routine use of PCR-restriction fragment lenght polymorphism
analysis for identification of mycobacteria growing in liquid media. J. Clin. Microbiol.
35, 79–85.
|
| |
| 69. |
Ericsson, H., and Stalhandske, P. (1997) PCR detection of Listeria monocytogenes in’ gravad’ rainbow trout. Int. J. Food Microbiol. 35, 281–285.
|
| |
| 70. |
Rahn, K., De Grandis, S. A., Clarke, R. C., et al. (1992) Amplification of an invA gene sequence of Salmonella typhimurium by polymerase chain reaction as a specific method of detection of Salmonella. Mol. Cell. Probes
6, 271–279.
|
| |
| 72. |
Wastling J. M., Nicoll, S., and Buxton, D. (1993) Comparison of two gene amplification methods for the detection of Toxoplasma
gondii in experimentally infected sheep. J. Med. Microbiol.
38, 360–365.
|
| |
| 73. |
Manzano, M., Cocolin, L., Cantoni, C., and Comi, G. (1998) A rapid method for the identification and partial serotyping of
Listeria monocytogenes in food by PCR and restriction enzyme analysis. Int. J. Food Microbiol.
42, 207–212.
|
| |
| 74. |
Willems, H., Thiele, D., Frölich-Ritter, R., and Krauss, H. (1994) Detection of Coxiella burnetii in cow’s milk using the polymerase chain reaction (PCR). J. Vet. Med. B.
41, 580–587.
|
| |
| 75. |
Schrader, C., Protz, D., and Süss, J. ( 2000) Coxiella burnetii, in Molekular-biologische Nachweismethoden ausgewählter Zoonoseerreger (Sachse K. and Gallien, P., eds.), bgvv-Hefte 02/2000, pp. 63–70.
|
| |
| 76. |
Roring, S., Hughes, M. S., Skuce, R. A., and Neill, S. D. (2000) Simultaneous detection and strain differentiation of Mycobacterium bovis directly from bovine tissue specimens by spoligotyping. Vet. Microbiol.
74, 227–236.
|
| |
| 77. |
Thierry, D., Brisson-Noel, A., Vincent-Levy-Frebault, V., Nguyen, S., Guesdon, J. L., and Gicquel, B. (1990) Characterization
of a Mycobacterium tuberculosis insertion sequence, IS 6110 and its application in diagnosis. J. Clin. Microbiol.
28, 2668–2673.
|
| |
| 78. |
de Lassence, A., Lecossier, D., Piere, C., Cadranel, J., Stern, M., and Hance, A. J. (1992) Detection of mycobacterial DNA
in pleural fluid from patients with tuberculosis pleurisy by means of the polymerase chain reaction: comparison of two protocols.
Thorax
47, 265–269.
|
| |
| 79. |
Mangiapan, G., Vokurka, M., Schouls, L., Cadranel, J., Lecossier, D., van Emb-den, J., and Hance, A. J. (1996) Sequence-capture
PCR improves detection of mycobacterial DNA in clinical specimens. J. Clin. Microbiol.
34, 1209–1215.
|
| |
| 80. |
Redstone, J. S., and Woodward, M. J. (1996) The development of a ligase medi-ated PCR with potential for the differentiation
of serovars within Leptospira interrogans. Vet. Microbiol. 51, 351–362.
|
| |
| 81. |
Appleyard, G. D., Zarlenga, D., Pozio, E., and Gajadhar, A. A. (1999) Differentiation of Trichinella genotypes by polymerase chain reaction using sequence-specific primers. Int. J. Parasitol.
85, 556–559.
|
| |
| 82. |
Innis, M.A. and Gelfand, D.H. ( 1990) Optimization of PCRs, in PCR Protocols: A Guide to Methods and Applications, (Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., eds.), Academic Press, New York, NY, USA, pp. 3–12.
|
| |
| 83. |
Sardelli, A. (1993) Plateau effect-understanding PCR limitations. Amplifications 9, 1–5.
|
| |
| 84. |
Ruano, G., Brash, G. R., and Kidd, K. K. (1991) PCR: The first few cycles. Amplifications
7, 1–4.
|
| |
| 85. |
Schnell, S. and Mendoza, C. (1997) Theoretical description of the polymerase chain reaction. J. Theor. Biol.
188, 313–318.
|
| |
| 86. |
Saiki, R. K., Scharf, S., Faloona, F., Mullis, K. B., Horn, G. T., Erlich, H. A., and Arnheim, N. (1985) Enzymatic amplification
of β-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anaemia. Science
230, 1350–1354.
|
| |
| 87. |
Schnell, S., and Mendoza, C. (1997) Enzymological considerations for a theoretical description of the quantitative competitive
polymerase chain reaction (QC-PCR). J. Theor. Biol.
184, 433–440.
|
| |
| 88. |
Morrison, C., and Gannon, F. (1994) The impact of the PCR plateau phase on quantitative PCR. Biochim. Biophys. Acta
1219, 493–498.
|
| |
| 89. |
Bloch, W. (1991) A biochemical perspective of the polymerase chain reaction. Biochem.
30, 2735–2747.
|
| |
| 90. |
Chester, N., and Marshak, D. R. (1993) Dimethyl sulfoxide-mediated primer Tm reduction: A method for analyzing the role of renaturation temperature in the polymerase chain reaction. Anal. Biochem.
209, 284–290.
|
| |
| 91. |
Compton, T. ( 1990) Degenerate primers for DNA amplification, in PCR Protocols: A Guide to Methods and Applications, (Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., eds.), Academic Press, New York, pp. 39–45.
|
| |
| 92. |
Viswanathan, V. K., Krcmarik, K., and Cianciotto, N. P. (1999) Template secondary structure promotes polymerase jumping during
PCR amplification. BioTechniques 27, 508–511.
|
| |
| 93. |
Loewen, P. C. and Switala, J. (1995) Template secondary structure can increase the error frequency of the DNA polymerase from
Thermus aquaticus. Gene
164, 56–63.
|
| |
| 94. |
Don, R. H., Cox, P. T., Wainwright, B. J., Baker, K., and Mattick, J. S. (1991) Touchdown PCR to circumvent spurious priming
during gene amplification. Nucl. Acids Res.
19, 4008.
|
| |
| 95. |
Watson, R. (1989) The formation of primer artifacts in polymerase chain reactions. Amplifications
2, 5–6.
|
| |
| 96. |
Gelfand, D. H. and White, T. J. ( 1990) Thermostable DNA polymerases, in PCR Protocols: A Guide to Methods and Applications, (Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., eds.), Academic Press, New York, NY, pp. 129–141.
|
| |
| 97. |
Erlich, A. H., Gelfand, D., and Sninsky, J. J. (1991) Recent advances in the polymerase chain reaction. Science
252, 1643–1651.
|
| |
| 98. |
Chou, Q., Russell, M., Birch, D. E., Raymond, J., and Bloch, W. (1992) Prevention of pre-PCR mis-priming and primer dimerization
improves low-copy-number amplifications. Nucl. Acids Res.
20, 1717–1723.
|
| |
| 99. |
Wages, J. M. and Fowler, A. K. (1993) Amplification of low copy number sequences. Amplifications
11, 1–3.
|
| |
| 100. |
Birch, D. E., Kolmodin, J., Wong, J., et al. (1996) The use of a thermally activated DNA polymerase PCR gives improved specificity,
sensitivity and product yield without additives or extra process steps. Nature
381, 445–446.
|
| |
| 101. |
Kellogg, D. E., Rabalkin, I., Chen, S., et al. (1994) TaqStart antibody: "e;hot start"e; PCR facilitated by neutralizing
monoclonal antibody directed against Taq DNA polymerase. BioTechniques
16, 1134–1137.
|
| |
| 102. |
Ailenberg, M., and Silverman, M. (2000) Controlled hot start and improved specificity in carrying out PCR utilizing touch-up
and loop incorporated primers (TULIPS). BioTechniques
29, 1018–1024.
|
| |
| 103. |
Kainz, P., Schmiedlechner, A., and Strack, H. B. (2000) Specificity-enhanced hot-start PCR: Addition of double-standed DNA
fragments adapted to the annealing temperature. BioTechniques
28, 278–282.
|
| |
| 104. |
Albert J., and Fenyö, E. M. (1990) Simple, sensitive, and specific detection of human immunodeficiency virus type 1 clinical
specimens by polymerase chain reaction with nested Primer. J. Clin. Microbiol.
28, 1560–1564.
|
| |
| 105. |
Chamberlain, J. S., Gibbs, R. A., Rainier, J. L., and Caskey, C. T. ( 1990) Multiplex PCR for the diagnosis of Duchenne muscular
dystrophy, in PCR Protocols: A Guide to Methods and Applications (Innis, M. A., Gelfand, D. H., Sninsky, J. J., and White, T. J., eds.), Academic Press, New York, pp. 272–281.
|
| |
| 106. |
Zimmermann, K., and Mannhalter, J. W. (1996) Technical aspects of quantitative competitive PCR. BioTechniques
21, 268–279.
|
| |
| 107. |
Raeymarkers, L. (1993) Quantitative PCR: Theoretical considerations with practical implications. Anal. Biochem.
214b, 582–585.
|
| |
| 108. |
Sachse, K., Zagon, J., Rüggeberg, H., Kruse, L., and Broll, H. (2001) Detection of genetic modifications in novel foods. Food Rev. Intl. (in press)
|
| |
| 109. |
Becker-Andró, Hahlbrock, K. (1989) Absolute mRNA quantification using the polymerase chain reaction (PCR). A novel approach
by a PCR aided transcript titration assay (PATTY). Nucleic Acids Res.
17, 9437–9446.
|
| |
| 110. |
Piatak, M. Jr., Luk K.-C., Williams, B., and Lifson, J. D. (1993) Quantitative competitive polymerase chain reaction for accurate
quantitation of HIV DNA and RNA species. BioTechniques
14, 70–81.
|
| |
| 111. |
Bercovich, D., Regev, Z., Ratz, T., Luder, A., Plotsky, Y., and Gruenbaum, Y. (1999) Quantitative ratio of primer pairs and
annealing temperature affecting PCR products in duplex amplification. BioTechniques
27, 762–770.
|
| |
| 112. |
Henegariu, O. Heerema, N. A., Dlouhy, S. R., Vance, G. H., and Vogt, P. H. (1997) Multiplex PCR: Critical parameters and step-by-step
protocol. BioTechniques
23, 504–511.
|
| |
| 113. |
Olcén, P., Lantz, P.-G., Bäckman, A., and Radström, P. (1995) Rapid diagnosis of bacterial meningitis by a seminested PCR
strategy. Scand. J. Infect. Dis.
27, 537–539.
|
| |
| 114. |
Radström, P., Bäckman, A., Qian, N., Kragsbjerg, Pahlson, C., and Olcén, P. (1994) Detection of bacterial DNA in cerebrospinal
fluid by an assay for simulta neous detection of Neisseria meningitidis, Haemophilus influenzae, and streptococci using a seminested PCR strategy. J. Clin. Microbiol.
32, 2738–2744.
|
| |
| 115. |
Tong, C. Y. W., Donnelly, C., Harvey, G., and Sillis, M. (1999) Multiplex polymerase chain reaction for the simultaneous detection
of Mycoplasma pneumoniae, Chlamydia pneumoniae, and Chlamydia psittaci in respiratory samples. J. Clin. Pathol.
52, 257–263.
|
| |
| 116. |
Wang, H., Fadl, A. A., and Khan, M. I. (1997) Multiplex PCR for avian pathogenic mycoplasmas. Mol. Cell. Probes
11, 211–216.
|
| |
| 117. |
Zarlenga, D. S., Chute, M. B., Martin, A., and Kapel, C.M. (1999) A multiplex PCR for unequivocal differentiation of all encapsulated
and non-encapsulated genotypes of Trichinella. Int. J. Parasitol.
29, 1859–1867.
|
| |
| 118. |
Burkardt, H. J. (2000) Standardization and quality control of PCR analyses. Clin. Chem. Lab. Med.
38, 87–91.
|
| |
| 119. |
Prariyachatigul, C., Chaiprasert, A., Meevootisom, V., and Pattanakitsakul, S. (1996) Assessment of a PCR technique for the
detection and identification of Cryptococcus neoformans. J. Med. Vet. Mycol.
34, 251–258.
|
| |