| 1. |
Glennie M. J. and Johnson P. W. M. (2000). Clinical trials of antibody therapy. Immunol. Today
21, 403–410.
<Occurrence Type="DOI"><Handle>10.1016/S0167-5699(00)01669-8</Handle></Occurrence>
|
| |
| 2. |
Smith G. P. (1985). Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface.
Science
228, 1315–1317.
|
| |
| 3. |
McCafferty J., Griffiths A. D., Winter G., and Chiswell D. J. (1990). Phage antibodies: filamentous phage displaying antibody
variable domains. Nature
348, 552–554.
|
| |
| 4. |
Barbas C. F., Kang A. S., Lerner R. A., and Benkovic S. J. (1991). Assembly of combinatorial libraries on phage surfaces:
The gene III site. Proc. Natl. Acad. Sci. USA
88, 7978–7982.
|
| |
| 5. |
Chang C. N., Landolfi N. F., and Queen C. (1991). Expression of antibody Fab domains on bacteriophage surfaces. Potential
use for antibody selection. J. Immunol.
147, 3610–3614.
|
| |
| 6. |
Hoogenboom H. R., Griffiths A. D., Johnson K. S., Chiswell D. J., Hudson P., and Winter G. (1991). Multi-subunit proteins
on the surface of filamentous phage: methodologies for displaying antibody (Fab) heavy and light chains. Nucleic Acids Res.
19, 4133–4137.
|
| |
| 7. |
Burton D. R., Barbas C. F., Persson M. A. A., Koenig S., Chanock R. M., and Lerner R. A. (1991). A large array of human monoclonal
antibodies to type 1 human immunodeficiency virus from combinatorial libraries of asymptomatic seropositive individuals. Proc. Natl. Acad. Sci. USA
88, 10,134–10,137.
|
| |
| 8. |
Zebedee S. L., Barbas C. F., Hom Y.-L., Caothien R. H., Graff R., DeGraw J., et al. (1992). Human combinatorial antibody libraries
to hepatitis B surface antigen. Proc. Natl. Acad. Sci. USA
89, 3175–3179.
|
| |
| 9. |
Marks J. D., Hoogenboom H. R., Bonnert T. P., McCafferty J., Griffiths A. D., and Winter G. (1991). By-passing immunization.
Human antibodies from V-gene libraries displayed on phage. J. Mol. Biol.
222, 581–597.
<Occurrence Type="DOI"><Handle>10.1016/0022-2836(91)90498-U</Handle></Occurrence>
|
| |
| 10. |
Griffiths A. D., Malmqvist M., Marks J. D., Bye J. M., Embleton M. J., McCafferty J., et al. (1993). Human anti-self antibodies
with high specificity from phage display libraries. EMBO J.
12, 725–734.
|
| |
| 11. |
Barbas C. F., Bain J. D., Hoesktra D. M., and Lerner R. A. (1992). Semisynthetic combinatorial antibody libraries: a chemical
solution to the diversity problem. Proc. Natl. Acad. Sci. USA
89, 4457–4461.
|
| |
| 12. |
Hoogenboom H. R. and Winter G. (1992). By-passing immunisation. Human antibodies from synthetic repertoires of germline VH gene segments rearranged in vitro. J. Mol. Biol.
227, 381–388.
<Occurrence Type="DOI"><Handle>10.1016/0022-2836(92)90894-P</Handle></Occurrence>
|
| |
| 13. |
Foote J. and Milstein C. (1991). Kinetic maturation of an immune response. Nature
352, 530–523.
|
| |
| 14. |
Perelson A. S. and Oster G. F. (1979). Theoretical studies of clonal selection: minimal antibody repertoire size and reliability
of self-non-self discrimination. J. Theor. Biol.
81, 645–670.
<Occurrence Type="DOI"><Handle>10.1016/0022-5193(79)90275-3</Handle></Occurrence>
|
| |
| 15. |
Vaughan T. J., Williams A. J., Pritchard K., Osbourn J. K., Pope A. R., Earnshaw J. C., et al. (1996). Human antibodies with
sub-nanomolar affinities isolated from a large non-immunized phage display library. Nat. Biotechnol.
14, 309–314.
|
| |
| 16. |
Sheets M. D., Amersdorfer P., Finnern R., Sargent P., Lindovist E., Schier R., et al. (1998). Efficient construction of a
large nonimmune phage antibody library: the production of high-affinity human single-chain antibodies to protein antigens.
Proc. Natl. Acad. Sci. USA
95, 6157–6162.
|
| |
| 17. |
de Haard H. J., van Neer N., Reurs A., Hufton S. E., Roovers R. C., Henderikx P., et al. (1999). A large non-immunized human
Fab fragment phage library that permits rapid isolation and kinetic analysis of high affinity antibodies. J. Biol. Chem.
274, 18,218–18,230.
|
| |
| 18. |
Sblattero D. and Bradbury A. (2000). Exploiting recombination in single bacteria to make large phage antibody libraries. Nat. Biotechnol.
18, 75–80.
|
| |
| 19. |
Griffiths A. D., Williams S. C., Hartley O., Tomlinson I. M., Waterhouse P., Crosby W. L., et al. (1994). Isolation of high
affinity human antibodies directly from large synthetic repertoires. EMBO J.
13, 3245–3260.
|
| |
| 20. |
Knappik A., Ge L., Honegger A., Pack P., Fischer M., Wellnhofer G., et al. (2000). Fully synthetic human combinatorial antibody
libraries (HuCAL) based on modular consensus frameworks and CDRs randomized with trinucleotides. J. Mol. Biol.
296, 57–86.
|
| |
| 21. |
de Bruin R., Spelt K., Mol J., Koes R., and Quattrocchio F. (1999). Selection of highaffinity phage antibodies from phage
display libraries. Nature Biotechnol.
17, 397–399.
|
| |
| 22. |
Usinger W. R. and Lucas A. H. (1999). Avidity as a determinant of the protective efficacy of human antibodies to pneumococcal
capsular polysaccharides. Infect. Immun.
67, 2366–2370.
|
| |
| 23. |
Johnson S., Griego S. D., Pfarr D. S., Doyle M. L., Woods R., Carlin D., et al. (1999). A direct comparison of the activities
of two humanized respiratory syncytial virus monoclonal antibodies: MEDI-493 and RSHZl9. J. Infect. Dis.
180, 35–40.
|
| |
| 24. |
Mita H., Yasueda H., and Akiyama K. (2000). Affinity of IgE antibody to antigen influences allergen-induced histamine release.
Clin. Exp. Allergy
30, 1583–1589.
|
| |
| 25. |
Parren P. W. H. I., Mondor I., Naniche D., Ditzel H. J., Klasse P. J., Burton D. R., and Sattentau Q. J. (1998). Neutralization
of human immunodeficiency virus type 1 by anti body to gp120 is determined primarily by occupancy of sites on the virion irrespective
of epitope specificity. J. Virol.
72, 3512–3519.
|
| |
| 26. |
Gram H., Marconi L. A., Barbas C. F., Collet T. A., Lerner R. A., and Kang A. S. (1992). In vitro selection and affinity maturation
of antibodies from a naive combinatorial immunoglobulin library. Proc. Natl. Acad. Sci. USA
89, 3576–3580.
|
| |
| 27. |
Yelton D. E., Rosok M. J., Cruz G., Cosand W. L., Bajorath J., et al. (1995). Affinity maturation of the BR96 anti-carcinoma
antibody by codon-based mutagenesis. J. Immunol.
155, 1994–2004.
|
| |
| 28. |
Yang W. P., Green K., Pinz-Sweeney S., Briones A. T., Burton D. R., and Barbas C. F. (1995). CDR walking mutagenesis for the
affinity maturation of a potent human anti-HIV-1 antibody into the picomolar range. J. Mol. Biol.
254, 392–403.
|
| |
| 29. |
Schier R., Bye J., Apell G., McCall A., Adams G. P., Malmqvist M., et al. (1996). Isolation of high-affinity monomeric human
anti-c-erbB-2 single chain Fv using affinitydriven selection. J. Mol. Biol.
255, 28–43.
|
| |
| 30. |
Schier R., McCall A., Adams G. P., Marshall K. W., Merritt H., Yim M., et al. (1996). Isolation of picomolar affinity anti-c-erbB-2
single-chain Fv by molecular evolution of the complementarity determining regions in the center of the antibody binding site.
J. Mol. Biol.
263, 551–567.
|
| |
| 31. |
Thompson J., Pope T., Tung J. S., Chan C., Hollis G., Mark G., and Johnson K. S. (1996). Affinity maturation of a high-affinity
human monoclonal antibody against the third hypervariable loop of human immunodeficiency virus: use of phage display to improve
affinity and broaden strain reactivity. J. Mol. Biol.
256, 77–88.
|
| |
| 32. |
Schier R., Balint R. F., McCall A., Apell G., Larrick J. W., and Marks J. D. (1996). Identification of functional and structural
amino-acid residues by parsimonious mutagenesis. Gene
169, 147–155.
<Occurrence Type="DOI"><Handle>10.1016/0378-1119(95)00821-7</Handle></Occurrence>
|
| |
| 33. |
Wu H., Beuerlein G., Nie Y., Smith H., Lee B. A., Hensler M., et al. (1998). Stepwise in vitro affinity maturation of Vitaxin,
an alphav beta3-specific humanized MAb. Proc. Natl. Acad. Sci. USA
95, 6037–6042.
|
| |
| 34. |
Chowdhury P. S. and Pastan I. (1999). Improving antibody affinity by mimicking somatic hypermutation in vitro. Nature Biotechnol.
17, 568–572.
|
| |
| 35. |
Boder E. T., Midelfort K. S., and Wittrup K. D. (2000). Directed evolution of antibody fragments with monovalent femtomolar
antigen-binding affinity. Proc. Natl. Acad. Sci. USA
97, 10,701–10,705.
|
| |
| 36. |
Adams G. P., Schier R., Marshall K., Wolf E. J., McCall A. M., Marks J. D., and Weiner L. M. (1998). Increased affinity leads
to improved selective tumor delivery of single-chain Fv antibodies. Cancer Res.
58, 485–490.
|
| |
| 37. |
Viti F., Tarli L., Giovannoni L., Zardi L., and Neri D. (1999). Increased binding affinity and valence of recombinant antibody
fragments lead to improved targeting of tumoral angiogenesis. Cancer Res.
59, 347–352.
|
| |
| 38. |
Adams G. P. and Schier R. (1999). Generating improved single-chain Fv molecules for tumor targeting. J. Immunol. Methods
231, 249–260.
<Occurrence Type="DOI"><Handle>10.1016/S0022-1759(99)00161-1</Handle></Occurrence>
|
| |
| 39. |
Glaser S. M., Yelton D. E., and Huse W. D. (1992). Antibody engineering by codonbased mutagenesis in a filamentous phage vector
system. J. Immunol.
149, 3903–3913.
|
| |
| 40. |
Martin F., Toniatti C., Salvati A. L., Ciliberto G., Cortese R., and Sollazzo M. (1996). Coupling protein design and in vitro
selection strategies: improving specificity and affinity of a designed beta-protein IL-6 antagonist. J. Mol. Biol.
255, 86–97.
|
| |
| 41. |
Hemminki A., Niemi S., Hoffren A. M., Hakalahti L., Soderlund H., and Takkinen K. (1998). Specificity improvement of a recombinant
anti-testosterone Fab fragment by CDRIII mutagenesis and phage display selection. Protein Eng.
11, 311–319.
|
| |
| 42. |
Chames P. and Baty D. (1998). Engineering of an anti-steroid antibody: amino acid substitutions change antibody fine specificity
from cortisol to estradiol. Clin. Chem. Lab Med.
36, 355–359.
|
| |
| 43. |
Willuda J., Honegger A., Waibel R., Schubiger P. A., Stahel R., Zangemeister-Wittke U., and Pluckthun A. (1999). High thermal
stability is essential for tumor targeting of antibody fragments: engineering of a humanized anti-epithelial glycoprotein-2
(epithelial cell adhesion molecule) single-chain Fv fragment. Cancer Res.
59, 5758–5767.
|
| |
| 44. |
Griffiths G. M., Berek C., Kaartinen M., and Milstein C. (1984). Somatic mutation and the maturation of immune response to
2-phenyl oxazolone. Nature
312, 271–275.
|
| |
| 45. |
Sandberg W. S. and Terwilliger T. C. (1993). Engineering multiple properties of a protein by combinatorial mutagenesis. Proc. Natl. Acad. Sci. USA
90, 8367–8371.
|
| |
| 46. |
Moore J. C. and Arnold F. H. (1996). Directed evolution of a para-nitrobenzyl esterase for aqueous-organic solvents. Nature Biotechnol.
14, 458–467.
|
| |
| 47. |
Wells J. A., Cunningham B. C., Graycar T. P., and Estell D. A. (1987). Recruitment of substrate-specificity properties from
one enzyme into a related one by protein engineering. Proc. Natl. Acad. Sci. USA
84, 5167–5171.
|
| |
| 48. |
Wells J. A., Powers D. B., Bott R. R., Graycar T. P., and Estell D. A. (1987). Designing substrate specificity by protein
engineering of electrostatic interactions. Proc. Natl. Acad. Sci. USA
84, 1219–1223.
|
| |
| 49. |
Russell A. J. and Fersht A. R. (1987). Rational modification of enzyme catalysis by engineering surface charge. Nature
328, 496–500.
|
| |
| 50. |
Huse W. D., Stinchcombe T. J., Glaser S. M., Starr L., Maclean M., et al. (1992). Application of a filamentous phage pVIII
fusion protein system suitable for efficient production, screening, and mutagenesis of F(ab) antibody fragments. J. Immunol.
149, 3914–3920.
|
| |
| 51. |
Glaser S., Kristensson K., Chilton T., and Huse W. D. (1995). Engineering the antibody combining site by codon-based mutagenesis
in a filamentous phage display system, in Antibody Engineering, 2nd ed. (Borrebaeck C. A. K., ed.), Oxford University Press, Oxford, pp. 117–131.
|
| |
| 52. |
Kunkel T. A. (1985). Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc. Natl. Acad. Sci. USA
82, 488–492.
|
| |
| 53. |
Perlak F. J. (1990). Single step large scale site-directed in vitro mutagenesis using multiple oligonucleotides. Nucleic Acids Res.
18, 7457–7458.
|
| |
| 54. |
Wu H., Nie Y., Huse W. D., and Watkins J. D. (1999). Humanization of a murine monoclonal antibody by simultaneous optimization
of framework and CDR residues. J. Mol. Biol.
294, 151–162.
|
| |
| 55. |
Wells J. A. (1990). Additivity of mutational effects in proteins. Biochemsitry
29, 8509–8517.
|
| |
| 56. |
Watkins J. D., Beuerlein G., Wu H., McFadden P. R., Pancook J. D., and Huse W. D. (1998). Discovery of human antibodies to
cell surface antigens by capture lift screening of phage-expressed antibody libraries. Anal. Biochem.
256, 169–177.
|
| |
| 57. |
Watkins J. D., Beuerlein G., Pecht G., McFadden P. R., Glaser S. M., and Huse W. D. (1997). Determination of the relative
affinities of antibody fragments expressed in Escherichia coli by enzyme-linked immunosorbent assay. Anal. Biochem.
253, 37–45.
|
| |