M13 Sequencing
By: Qingzhong Yu3
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The sequencing of DNA has undergone rapid improvement since the introduction of the chain-termination DNA sequencing method
(1) and the construction of convenient single-stranded DNA cloning vectors, such as the bacteriophage M13 cloning vectors and
their derivatives (2,3). The chain-termination method involves the synthesis of a DNA strand by a DNA polymerase in vitro using a single-stranded
DNA template. Synthesis is initiated at only one site where an oligonucleotide primer anneals to the template. The synthesis
reaction is terminated by the incorporation of a nucleotide analog that will not support continued DNA elongation. The chain-terminating
nucleotide analogs are the 2′, 3′-dideoxynucleotide 5′-triphosphates (ddNTPs), which lack the 3′-OH group necessary for DNA
chain elongation. When proper mixtures of deoxynucleotide triphosphates (dNTPs) and one of the four ddNTPs are used, enzymecatalyzed
polymerization will be terminated in a fraction of the population of chains at each site where the ddNTP is incorporated.
Four separate reactions, each with a different ddNTP, give complete sequence information.
Book Title: DNA Sequencing Protocols
Series: Methods in Molecular Biology | Volume: 167 | Pub. Date: Jan-10-2001 | Page Range: 33-38 | DOI: 10.1385/1-59259-113-2:033
Subject: Genetics/Genomics
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