12. Amplification with Arbitrary Primers
| Abstract |
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Several methods have been published that rely on the use of short oligonucleotide primers with arbitrary sequences to amplify
discrete DNA fragments by the polymerase chain reaction (PCR) (1,2). Typically, a single arbitrary primer is used in each reaction and amplification is achieved when the same sequence is present
in inverted orientation at two sites separated by less than a few kilobases. These methods have several advantages:
| 1. | They can be used to produce quickly large numbers of discrete DNA fragments without prior sequence information; |
| 2. | Owing to the random nature of the process, the amplified fragments are likely to be evenly distributed across a genomic region; |
| 3. | Because they do not rely on the presence of species-specific repetitive sequences (e.g., Alu repeats [3]), they can be used to analyze the genome of any species. |
Affiliation(s): (2) Department of Anthropology, Northwestern University, Evanston, IL
(3) Neurogenetics Laboratory, University of California, San Francisco, CA
(3) Neurogenetics Laboratory, University of California, San Francisco, CA
Book Title: YAC Protocols
Series: Methods in Molecular Biology | Volume: 54 | Pub. Date: Oct-23-1995 | Page Range: 123-129 | DOI: 10.1385/0-89603-313-9:123
Subject: Genetics/Genomics
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