6. Autophagic Proteolysis of Long-Lived Proteins in Nonliver Cells
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Autophagy is a cellular homeostasis pathway used to sustain cellular anabolic needs during times of nutrient or energy deprivation.
Autophagosomes sequester cytoplasmic constituents, including macromolecules such as long-lived proteins. Upon fusion of autophagosomes
with lysosomes, the engulfed cargo is degraded. The proteolysis of longlived proteins by macroautophagy is a standard, specific
measure of autophagic degradation and represents an end-point assay for the pathway. The assay is based on a pulse-chase approach,
whereby cellular proteins are radiolabeled by an isotopically marked amino acid, the short-lived, rapidly turned over, proteins
are allowed to be degraded during a long chase period, and then the remaining, stable radiolabeled proteins are subjected
to autophagic degradation. The classical application of this method has been in hepatocytes, but the recent growth of interest
in autophagy has necessitated adaptation of this method in nonliver cells. Here we describe a protocol to quantify autophagic
degradation of longlived proteins in macrophages. This chapter details the method of analyzing autophagic proteolysis in RAW264.7
mouse macrophages.
Affiliation(s): (3) Department of Molecular Genetics and Microbiology, University of New Mexico School of Medicine, Albuquerque, NM
(4) Health Sciences Center, Department Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, Albuquerque, NM, USA
(4) Health Sciences Center, Department Molecular Genetics and Microbiology, University of New Mexico Health Sciences Center, Albuquerque, NM, USA
Book Title: Autophagosome and Phagosome
Series: Methods in Molecular Biology | Volume: 445 | Pub. Date: May-01-2008 | Page Range: 111-117 | DOI: 10.1007/978-1-59745-157-4_6
Subject: Cell Biology
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